Publications

@article{cuturello2020assessing,

title = {Assessing the accuracy of direct-coupling analysis for RNA contact prediction},

author = {Francesca Cuturello and Guido Tiana and Giovanni Bussi},

year  = {2020},

date = {2020-01-01},

journal = {RNA},

volume = {26},

number = {5},

pages = {637–647},

publisher = {Cold Spring Harbor Lab},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{reisser2020conformational,

title = {Conformational ensembles of an RNA hairpin using molecular dynamics and sparse NMR data},

author = {Sabine Reißer and Silvia Zucchelli and Stefano Gustincich and Giovanni Bussi},

year  = {2020},

date = {2020-01-01},

journal = {Nucleic Acids Research},

volume = {48},

number = {3},

pages = {1164–1174},

publisher = {Oxford University Press},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{bussi2020using,

title = {Using metadynamics to explore complex free-energy landscapes},

author = {Giovanni Bussi and Alessandro Laio},

year  = {2020},

date = {2020-01-01},

journal = {Nature Reviews Physics},

volume = {2},

number = {4},

pages = {200–212},

publisher = {Nature Publishing Group UK London},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{mlynsky2020fine,

title = {Fine-tuning of the AMBER RNA force field with a new term adjusting interactions of terminal nucleotides},

author = {Vojte ch Mly nsky and Petra Ku hrova and Toma s Ku hr and Michal Otyepka and Giovanni Bussi and Pavel Bana s and Jir i S poner},

year  = {2020},

date = {2020-01-01},

journal = {Journal of chemical theory and computation},

volume = {16},

number = {6},

pages = {3936–3946},

publisher = {American Chemical Society},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{calonaci2020machine,

title = {Machine learning a model for RNA structure prediction},

author = {Nicola Calonaci and Alisha Jones and Francesca Cuturello and Michael Sattler and Giovanni Bussi},

year  = {2020},

date = {2020-01-01},

journal = {NAR Genomics and Bioinformatics},

volume = {2},

number = {4},

pages = {lqaa090},

publisher = {Oxford University Press},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{frohlking2020towards,

title = {Towards empirical force fields that match experimental observables},

author = {Thorben Fröhlking and Mattia Bernetti and Nicola Calonaci and Giovanni Bussi},

year  = {2020},

date = {2020-01-01},

journal = {The Journal of Chemical Physics},

volume = {152},

number = {23},

pages = {230902},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{bernetti2020pressure,

title = {Pressure control using stochastic cell rescaling},

author = {Mattia Bernetti and Giovanni Bussi},

year  = {2020},

date = {2020-01-01},

journal = {The Journal of Chemical Physics},

volume = {153},

number = {11},

pages = {114107},

publisher = {AIP Publishing LLC},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{bussi2020exploring,

title = {Exploring complex free-energy landscapes by metadynamics},

author = {Giovanni Bussi and Alessandro Laio},

year  = {2020},

date = {2020-01-01},

journal = {Nat Rev Phys},

volume = {2},

number = {4},

pages = {200–12},

keywords = {},

pubstate = {published},

tppubtype = {article}

}